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Pure Appl. Chem., 1994, Vol. 66, No. 8, pp. 1641-1666

http://dx.doi.org/10.1351/pac199466081641

IUPAC-IUBMB JOINT COMMISSION ON BIOCHEMICAL THERMODYNAMICS

Recommendations for nomenclature and tables in biochemical thermodynamics (IUPAC Recommendations 1994)

R. A. Alberty

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  • Goldberg Robert N.: Standards in biothermodynamics. Perspectives in Science 2014. <http://dx.doi.org/10.1016/j.pisc.2014.02.001>
  • Arena Giuseppe, Pappalardo Giuseppe, Sovago Imre, Rizzarelli Enrico: Copper(II) interaction with amyloid-β: Affinity and speciation. Coord Rev 2012, 256, 3. <http://dx.doi.org/10.1016/j.ccr.2011.07.012>
  • Malucelli E., Iotti S., Manners D.N., Testa C., Martinuzzi A., Barbiroli B., Lodi R.: The role of pH on the thermodynamics and kinetics of muscle biochemistry: An in vivo study by 31P-MRS in patients with myo-phosphorylase deficiency. Biochim Biophys Acta Bioenerg 2011, 1807, 1244. <http://dx.doi.org/10.1016/j.bbabio.2011.06.013>
  • Alberty Robert A., Cornish-Bowden Athel, Goldberg Robert N., Hammes Gordon G., Tipton Keith, Westerhoff Hans V.: Recommendations for terminology and databases for biochemical thermodynamics. biophys chem 2011, 155, 89. <http://dx.doi.org/10.1016/j.bpc.2011.03.007>
  • Goldberg Robert N., Lang Brian E., Selig Michael J., Decker Stephen R.: A calorimetric and equilibrium investigation of the reaction {methyl ferulate(aq)+H2O(l)=methanol(aq)+ferulic acid(aq)}. K J CHEM THERMODYN 2011, 43, 235. <http://dx.doi.org/10.1016/j.jct.2010.09.002>
  • Martín del Campo Julia S., Patiño Rodrigo: Kinetic and thermodynamic study of the reaction catalyzed by glucose-6-phosphate dehydrogenase with nicotinamide adenine dinucleotide. Thermochimica 2011, 517, 40. <http://dx.doi.org/10.1016/j.tca.2011.01.030>
  • Frenkel Michael, Chirico Robert D., Diky Vladimir, Brown Paul L., Dymond John H., Goldberg Robert N., Goodwin Anthony R. H., Heerklotz Heiko, Königsberger Erich, Ladbury John E.: Extension of ThermoML: The IUPAC standard for thermodynamic data communications (IUPAC Recommendations 2011). PureAppl Chem 2011, 1. <http://dx.doi.org/10.1351/PAC-REC-11-05-01>
  • Goldberg Robert N., Lang Brian E., Lo Catherine, Ross David J., Tewari Yadu B.: Thermodynamics of the hydrolysis reactions of α-d-galactose 1-phosphate, sn-glycerol 3-phosphate, 4-nitrophenyl phosphate, phosphocreatine, and 3-phospho-d-glycerate. K J CHEM THERMODYN 2009, 41, 654. <http://dx.doi.org/10.1016/j.jct.2008.12.017>
  • Gibb Corinne L.D., Gibb Bruce C.: Guests of differing polarities provide insight into structural requirements for templates of water-soluble nano-capsules. Tetrahedron 2009, 65, 7240. <http://dx.doi.org/10.1016/j.tet.2009.01.106>
  • Méndez Eduardo: Biochemical thermodynamics under near physiological conditions. Biochem Mol Biol Educ 2008, 36, 116. <http://dx.doi.org/10.1002/bmb.20157>
  • Tewari Yadu B., Lang Brian E., Decker Stephen R., Goldberg Robert N.: Thermodynamics of the hydrolysis reactions of 1,4-β-d-xylobiose, 1,4-β-d-xylotriose, d-cellobiose, and d-maltose. K J CHEM THERMODYN 2008, 40, 1517. <http://dx.doi.org/10.1016/j.jct.2008.05.015>
  • Tewari Yadu B., Kishore Nand, Lang Brian E., Goldberg Robert N.: Thermodynamics of reactions catalyzed by d-hydantoinase and N-carbamoyl-d-amino acid hydrolase. K J CHEM THERMODYN 2007, 39, 717. <http://dx.doi.org/10.1016/j.jct.2006.10.010>
  • Alberty Robert A.: Relations between biochemical thermodynamics and biochemical kinetics. biophys chem 2006, 124, 11. <http://dx.doi.org/10.1016/j.bpc.2006.05.024>
  • Alberty Robert A.: Thermodynamic properties of oxidoreductase, transferase, hydrolase, and ligase reactions. Archives of Biochemistry and Biophysics 2005, 435, 363. <http://dx.doi.org/10.1016/j.abb.2004.12.027>
  • Alberty Robert A.: Thermodynamics of the mechanism of the nitrogenase reaction. biophys chem 2005, 114, 115. <http://dx.doi.org/10.1016/j.bpc.2004.11.009>
  • Goldberg Robert N., Tewari Yadu B.: Thermodynamics of the hydrolysis reactions of nitriles. K J CHEM THERMODYN 2005, 37, 720. <http://dx.doi.org/10.1016/j.jct.2004.11.011>
  • Boerio-Goates Juliana A., Hopkins Sarah D., Monteiro Ricardo A.R., Ribeiro da Silva Maria D.M.C., Ribeiro da Silva Manuel A.V., Goldberg Robert N.: Thermochemistry of inosine. K J CHEM THERMODYN 2005, 37, 1239. <http://dx.doi.org/10.1016/j.jct.2005.03.001>
  • Tewari Yadu B., Gery Patrick D., Vaudin Mark D., Mighell Alan D., Klein Ralph, Goldberg Robert N.: Saturation molalities and standard molar enthalpies of solution of cytidine(cr), hypoxanthine(cr), thymidine(cr), thymine(cr), uridine(cr), and xanthine(cr) in H2O(l). K J CHEM THERMODYN 2004, 36, 645. <http://dx.doi.org/10.1016/j.jct.2004.04.005>
  • Goldberg Robert N, Tewari Yadu B: Thermodynamics of the hydrolysis reactions of adenosine 3′,5′-(cyclic)phosphate(aq) and phosphoenolpyruvate(aq); the standard molar formation properties of 3′,5′-(cyclic)phosphate(aq) and phosphoenolpyruvate(aq). K J CHEM THERMODYN 2003, 35, 1809. <http://dx.doi.org/10.1016/j.jct.2003.08.002>
  • Todd King M.: Thermodynamics of the reduction of NADP with 2-propanol catalyzed by an NADP-dependent alcohol dehydrogenase. Archives of Biochemistry and Biophysics 2003, 410, 280. <http://dx.doi.org/10.1016/S0003-9861(02)00692-6>
  • Tewari Yadu B., Goldberg Robert N.: Thermodynamics of the oxidation–reduction reaction {2 glutathionered(aq)+NADPox(aq)=glutathioneox(aq)+NADPred(aq)}. K J CHEM THERMODYN 2003, 35, 1361. <http://dx.doi.org/10.1016/S0021-9614(03)00111-3>
  • Alberty Robert A.: The role of water in the thermodynamics of dilute aqueous solutions. biophys chem 2003, 100, 183. <http://dx.doi.org/10.1016/S0301-4622(02)00280-6>
  • Goldberg Robert N, Tewari Yadu B: Thermochemistry of the biochemical reaction: { pyrophosphate(aq) + H2O(l) = 2 phosphate(aq)}. K J CHEM THERMODYN 2002, 34, 821. <http://dx.doi.org/10.1006/jcht.2002.0931>
  • Alberty Robert A.: Use of legendre transforms in chemical thermodynamics. K J CHEM THERMODYN 2002, 34, 1787. <http://dx.doi.org/10.1016/S0021-9614(02)00170-2>
  • Tewari Yadu B., Goldberg Robert N., Hawkins Alastair R., Lamb Heather K.: A thermodynamic study of the reactions: {2-dehydro-3-deoxy-d-arabino-heptanoate 7-phosphate(aq)=3-dehydroquinate(aq) + phosphate(aq)} and {3-dehydroquinate(aq)=3-dehydroshikimate(aq)+H2O(l)}. K J CHEM THERMODYN 2002, 34, 1671. <http://dx.doi.org/10.1016/S0021-9614(02)00226-4>
  • Tewari Yadu B., Jensen Pia Y., Kishore Nand, Mayhew Martin P., Parsons James F., Eisenstein Edward, Goldberg Robert N.: Thermodynamics of reactions catalyzed by PABA synthase. biophys chem 2002, 96, 33. <http://dx.doi.org/10.1016/S0301-4622(02)00034-0>
  • Tewari Yadu B., Kishore Nand, Bauerle Ronald, LaCourse William R., Goldberg Robert N.: Thermochemistry of the reaction { phospho enol pyruvate(aq)+ -erythrose 4-phosphate(aq) + H2 O(l) = 2-dehydro-3-deoxy- - arabino -heptonate 7-phosphate(aq) + phosphate(aq) }. K J CHEM THERMODYN 2001, 33, 1791. <http://dx.doi.org/10.1006/jcht.2001.0862>
  • Tewari, Yadu B., Davis, Andrew M., Reddy, Prasad, Goldberg Robert N.: A thermodynamic study of the conversion of chorismate to isochorismate. K J CHEM THERMODYN 2000, 32, 1057. <http://dx.doi.org/10.1006/jcht.2000.0677>
  • Tewari Yadu B., Goldberg Robert N., Rozzell J.David: Thermodynamics of reactions catalysed by branched-chain-amino-acid transaminase. K J CHEM THERMODYN 2000, 32, 1381. <http://dx.doi.org/10.1006/jcht.2000.0686>
  • Byrnes W.Malcolm, Goldberg Robert N., Holden Marcia J., Mayhew Martin P., Tewari Yadu B.: Thermodynamics of reactions catalyzed by anthranilate synthase. biophys chem 2000, 84, 45. <http://dx.doi.org/10.1016/S0301-4622(99)00145-3>
  • Tewari Yadu B.: Thermodynamics of the lipase-catalyzed transesterification of (−)-menthol and dodecyl dodecanoate in organic solvents. Mol Catal B Enzym 2000, 9, 83. <http://dx.doi.org/10.1016/S1381-1177(99)00087-9>
  • Alberty Robert A.: Calculating apparent equilibrium constants of enzyme-catalyzed reactions at pH 7. Biochem Educ 2000, 28, 12. <http://dx.doi.org/10.1111/j.1539-3429.2000.tb00003.x>
  • Alberty Robert A.: Calculation of Standard Transformed Gibbs Energies and Standard Transformed Enthalpies of Biochemical Reactants. Archives of Biochemistry and Biophysics 1998, 353, 116. <http://dx.doi.org/10.1006/abbi.1998.0638>
  • Alberty Robert A.: Change in the binding of hydrogen ions and magnesium ions in the hydrolysis of ATP. biophys chem 1998, 70, 109. <http://dx.doi.org/10.1016/S0301-4622(97)00114-2>
  • Kishore Nand, Tewari Yadu B., Akers David L., Goldberg Robert N., Wilson Miles Edith: A thermodynamic investigation of reactions catalyzed by tryptophan synthase. biophys chem 1998, 73, 265. <http://dx.doi.org/10.1016/S0301-4622(98)00151-3>
  • NOMENCLATURE ANNOUNCEMENT. Archives of Biochemistry and Biophysics 1997, 344, 242. <http://dx.doi.org/10.1006/abbi.1997.0206>
  • Alberty Robert A.: Apparent Equilibrium Constants and Standard Transformed Gibbs Energies of Biochemical Reactions Involving Carbon Dioxide. Archives of Biochemistry and Biophysics 1997, 348, 116. <http://dx.doi.org/10.1006/abbi.1997.0403>
  • Zhang Weiqi, Truttmann Anita C., Lüthi Daniel, McGuigan John A.S.: Apparent Mg2+–Adenosine 5-Triphosphate Dissociation Constant Measured with Mg2+Macroelectrodes under Conditions Pertinent to31P NMR Ionized Magnesium Determinations. Analytical Biochemistry 1997, 251, 246. <http://dx.doi.org/10.1006/abio.1997.2238>
  • Alberty Robert A.: Thermodynamics of the binding of ligands by macromolecules. biophys chem 1996, 62, 141. <http://dx.doi.org/10.1016/S0301-4622(96)02200-4>
  • Veech Richard L., Gates Denise N., Crutchfield Calvin, Gitomer William L., Kashiwaya Yoshihiro, King M. Todd, Wondergern Robert: Metabolic Hyperpolarization of Liver by Ethanol: The Importance of Mg2+ and H+ in Determining Impermeant Intracellular Anionic Charge and Energy of Metabolic Reactions. Alcohol Clin Exp Res 1994, 18, 1040. <http://dx.doi.org/10.1111/j.1530-0277.1994.tb00081.x>