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Pure Appl. Chem., 2001, Vol. 73, No. 7, pp. 1163-1172

http://dx.doi.org/10.1351/pac200173071163

Bioremediation. An overview

M. Vidali

Dipartimento di Chimica Inorganica, Metallorganica, e Analitica, Università di Padova Via Loredan, 4 35128 Padova, Italy

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  • Jafari Seyed Ali, Cheraghi Sama, Mirbakhsh Maryam, Mirza Roozbeh, Maryamabadi Ammar: Employing Response Surface Methodology for Optimization of Mercury Bioremediation by Vibrio parahaemolyticus PG02 in Coastal Sediments of Bushehr, Iran. Clean Soil Air Water 2014, n/a. <http://dx.doi.org/10.1002/clen.201300616>
  • San Miguel Angélique, Roy Julien, Gury Jérôme, Monier Armelle, Coissac Eric, Ravanel Patrick, Geremia Roberto A., Raveton Muriel: Effects of organochlorines on microbial diversity and community structure in Phragmites australis rhizosphere. Appl Microbiol Biotechnol 2014, 98, 4257. <http://dx.doi.org/10.1007/s00253-014-5545-6>
  • Hadibarata Tony, Teh Zee Chuang: Optimization of pyrene degradation by white-rot fungus Pleurotus pulmonarius F043 and characterization of its metabolites. Bioprocess Biosyst Eng 2014. <http://dx.doi.org/10.1007/s00449-014-1140-6>
  • Kang Jun Won: Removing environmental organic pollutants with bioremediation and phytoremediation. Biotechnol Lett 2014. <http://dx.doi.org/10.1007/s10529-014-1466-9>
  • Tanida Ikuhiro, Sakaue Asami, Osawa Satoshi: Development of a Safe Solid-State Microorganism/Biodegradable Polymer Composite for Decomposition of Formaldehyde. J Polym Environ 2014. <http://dx.doi.org/10.1007/s10924-014-0644-0>
  • Reis Izabela, Almeida C. Marisa R., Magalhães Catarina M., Cochofel Jaqueline, Guedes Paula, Basto M. Clara P., Bordalo Adriano A., Mucha Ana P.: Bioremediation potential of microorganisms from a sandy beach affected by a major oil spill. Environ Sci Pollut Res 2014, 21, 3634. <http://dx.doi.org/10.1007/s11356-013-2365-7>
  • Salam L. B., Ilori M. O., Amund O. O., Numata M., Horisaki T., Nojiri H.: Carbazole angular dioxygenation and mineralization by bacteria isolated from hydrocarbon-contaminated tropical African soil. Environ Sci Pollut Res 2014. <http://dx.doi.org/10.1007/s11356-014-2855-2>
  • Azad Md. Abul Kalam, Amin Latifah, Sidik Nik Marzuki: Genetically engineered organisms for bioremediation of pollutants in contaminated sites. Chin. Sci. Bull. 2014, 59, 703. <http://dx.doi.org/10.1007/s11434-013-0058-8>
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  • Mani D., Kumar Chitranjan: Biotechnological advances in bioremediation of heavy metals contaminated ecosystems: an overview with special reference to phytoremediation. Int. J. Environ. Sci. Technol. 2014, 11, 843. <http://dx.doi.org/10.1007/s13762-013-0299-8>
  • Shankar S., Kansrajh C., Dinesh M. G., Satyan R. S., Kiruthika S., Tharanipriya A.: Application of indigenous microbial consortia in bioremediation of oil-contaminated soils. Int. J. Environ. Sci. Technol. 2014, 11, 367. <http://dx.doi.org/10.1007/s13762-013-0366-1>
  • Ugochukwu Uzochukwu C., Jones Martin D., Head Ian M., Manning David. A.C., Fialips Claire I.: Effect of acid activated clay minerals on biodegradation of crude oil hydrocarbons. International Biodeterioration & Biodegradation 2014, 88, 185. <http://dx.doi.org/10.1016/j.ibiod.2013.10.018>
  • Aleer Sam, Adetutu Eric M., Weber John, Ball Andrew S., Juhasz Albert L.: Potential impact of soil microbial heterogeneity on the persistence of hydrocarbons in contaminated subsurface soils. Journal of Environmental Management 2014, 136, 27. <http://dx.doi.org/10.1016/j.jenvman.2014.01.031>
  • Martin Belinda C., George Suman J., Price Charles A., Ryan Megan H., Tibbett Mark: The role of root exuded low molecular weight organic anions in facilitating petroleum hydrocarbon degradation: Current knowledge and future directions. Science of The Total Environment 2014, 472, 642. <http://dx.doi.org/10.1016/j.scitotenv.2013.11.050>
  • Mori Yasushi, Hirai Yuuya: Effective Vertical Solute Transport in Soils by Artificial Macropore System. J. Hazard. Toxic Radioact. Waste 2014, 18, 04014003. <http://dx.doi.org/10.1061/(ASCE)HZ.2153-5515.0000192>
  • Gonçalves F. A. G., Colen G., Takahashi J. A.: Yarrowia lipolytica and Its Multiple Applications in the Biotechnological Industry. The Scientific World Journal 2014, 2014, 1. <http://dx.doi.org/10.1155/2014/476207>
  • Bai Lu, Deng Liu, Liu Ling, Yong Daming, Yu Dengbin, Dong Shaojun: On the Use of Carbon Nanotubes to Promote the Electricity Generation During Sulfate Removal. Electroanalysis 2013, 25, 833. <http://dx.doi.org/10.1002/elan.201200138>
  • Lopes Ana R., Danko Anthony S., Manaia Célia M., Nunes Olga C.: Molinate biodegradation in soils: natural attenuation versus bioaugmentation. Appl Microbiol Biotechnol 2013, 97, 2691. <http://dx.doi.org/10.1007/s00253-012-4096-y>
  • Almeida Raquel, Mucha Ana P., Teixeira Catarina, Bordalo Adriano A., Almeida C. Marisa R.: Biodegradation of petroleum hydrocarbons in estuarine sediments: metal influence. Biodegradation 2013, 24, 111. <http://dx.doi.org/10.1007/s10532-012-9562-9>
  • Ribeiro Rogers, Nardi Ivana Ribeiro, Fernandes Bruna Soares, Foresti Eugenio, Zaiat Marcelo: BTEX removal in a horizontal-flow anaerobic immobilized biomass reactor under denitrifying conditions. Biodegradation 2013, 24, 269. <http://dx.doi.org/10.1007/s10532-012-9585-2>
  • Ugochukwu Uzochukwu C., Head Ian M., Manning David A. C.: Biodegradation and adsorption of C1- and C2-phenanthrenes and C1- and C2-dibenzothiophenes in the presence of clay minerals: effect on forensic diagnostic ratios. Biodegradation 2013. <http://dx.doi.org/10.1007/s10532-013-9678-6>
  • Odukkathil Greeshma, Vasudevan Namasivayam: Toxicity and bioremediation of pesticides in agricultural soil. Rev Environ Sci Biotechnol 2013, 12, 421. <http://dx.doi.org/10.1007/s11157-013-9320-4>
  • Bahar Md Mezbaul, Megharaj Mallavarapu, Naidu Ravi: Bioremediation of Arsenic-Contaminated Water: Recent Advances and Future Prospects. Water Air Soil Pollut 2013, 224. <http://dx.doi.org/10.1007/s11270-013-1722-y>
  • Almeida C. Marisa R., Reis Izabela, Couto M. Nazaré, Bordalo Adriano. A., Mucha Ana P.: Potential of the microbial community present in an unimpacted beach sediment to remediate petroleum hydrocarbons. Environ Sci Pollut Res 2013, 20, 3176. <http://dx.doi.org/10.1007/s11356-012-1240-2>
  • Yu Wenjuan, Kuang Shaoping, Zhao Laishi: Uptake, accumulation and translocation of polycyclic aromatic hydrocarbons by winter wheat cultured on oily sludge-amended soil. Chin. J. Geochem. 2013, 32, 295. <http://dx.doi.org/10.1007/s11631-013-0635-1>
  • Das S., Ram S. S., Sahu H. K., Rao D. S., Chakraborty A., Sudarshan M., Thatoi H. N.: A study on soil physico-chemical, microbial and metal content in Sukinda chromite mine of Odisha, India. Environ Earth Sci 2013, 69, 2487. <http://dx.doi.org/10.1007/s12665-012-2074-4>
  • Srikhaow Assadawoot, Smith Siwaporn Meejoo: Preparation of Cu2(OH)3NO3/ZnO, a novel catalyst for methyl orange oxidation under ambient conditions. Applied Catalysis B: Environmental 2013, 130-131, 84. <http://dx.doi.org/10.1016/j.apcatb.2012.10.018>
  • MacKinnon Gillian, Duncan Henry J.: Phytotoxicity of branched cyclohexanes found in the volatile fraction of diesel fuel on germination of selected grass species. Chemosphere 2013, 90, 952. <http://dx.doi.org/10.1016/j.chemosphere.2012.06.038>
  • Chen Shuona, Yin Hua, Ye Jinshao, Peng Hui, Zhang Na, He Baoyan: Effect of copper(II) on biodegradation of benzo[a]pyrene by Stenotrophomonas maltophilia. Chemosphere 2013, 90, 1811. <http://dx.doi.org/10.1016/j.chemosphere.2012.09.009>
  • Mori Yasushi, Suetsugu Atsushi, Matsumoto Yuko, Fujihara Atsushi, Suyama Kosuke: Enhancing bioremediation of oil-contaminated soils by controlling nutrient dispersion using dual characteristics of soil pore structure. Ecological Engineering 2013, 51, 237. <http://dx.doi.org/10.1016/j.ecoleng.2012.12.009>
  • Ribeiro Hugo, Almeida C. Marisa R., Mucha Ana P., Teixeira Catarina, Bordalo Adriano A.: Influence of natural rhizosediments characteristics on hydrocarbons degradation potential of microorganisms associated to Juncus maritimus roots. International Biodeterioration & Biodegradation 2013, 84, 86. <http://dx.doi.org/10.1016/j.ibiod.2012.05.039>
  • Hidayat Asep, Tachibana Sanro: Degradation of 2,4,8-trichlorodibenzofuran by a new isolate of Cerrena sp. F0607. International Biodeterioration & Biodegradation 2013, 77, 51. <http://dx.doi.org/10.1016/j.ibiod.2012.11.004>
  • Pimmata Patcharaporn, Reungsang Alissara, Plangklang Pensri: Comparative bioremediation of carbofuran contaminated soil by natural attenuation, bioaugmentation and biostimulation. International Biodeterioration & Biodegradation 2013, 85, 196. <http://dx.doi.org/10.1016/j.ibiod.2013.07.009>
  • Patterson B.M., Aravena R., Davis G.B., Furness A.J., Bastow T.P., Bouchard D.: Multiple lines of evidence to demonstrate vinyl chloride aerobic biodegradation in the vadose zone, and factors controlling rates. Journal of Contaminant Hydrology 2013, 153, 69. <http://dx.doi.org/10.1016/j.jconhyd.2013.07.008>
  • Chishti Zia, Hussain Sarfraz, Arshad Khaliq R., Khalid Azeem, Arshad Muhammad: Microbial degradation of chlorpyrifos in liquid media and soil. Journal of Environmental Management 2013, 114, 372. <http://dx.doi.org/10.1016/j.jenvman.2012.10.032>
  • Tsai Shen-Long, Lin Chi-Wen, Wu Chih-Hung, Shen Chih-Min: Kinetics of xenobiotic biodegradation by the Pseudomonas sp. YATO411 strain in suspension and cell-immobilized beads. Journal of the Taiwan Institute of Chemical Engineers 2013, 44, 303. <http://dx.doi.org/10.1016/j.jtice.2012.11.004>
  • Chang Young-Cheol, Choi DuBok, Takamizawa Kazuhiro, Kikuchi Shintaro: Effect of blast furnace dust on the degradation of chlorinated organic and endocrine disrupting compounds. Process Biochemistry 2013, 48, 694. <http://dx.doi.org/10.1016/j.procbio.2013.02.012>
  • Agamuthu P., Tan Y.S., Fauziah S.H.: Bioremediation of Hydrocarbon Contaminated Soil Using Selected Organic Wastes. Procedia Environmental Sciences 2013, 18, 694. <http://dx.doi.org/10.1016/j.proenv.2013.04.094>
  • Silva-Castro Gloria Andrea, Rodelas Belén, Perucha Carlos, Laguna Jaime, González-López Jesús, Calvo Concepción: Bioremediation of diesel-polluted soil using biostimulation as post-treatment after oxidation with Fenton-like reagents: Assays in a pilot plant. Science of The Total Environment 2013, 445-446, 347. <http://dx.doi.org/10.1016/j.scitotenv.2012.12.081>
  • Ribeiro Hugo, Mucha Ana P., Marisa R. Almeida C., Bordalo Adriano A.: Bacterial community response to petroleum contamination and nutrient addition in sediments from a temperate salt marsh. Science of The Total Environment 2013, 458-460, 568. <http://dx.doi.org/10.1016/j.scitotenv.2013.04.015>
  • Patterson B. M., Furness A. J., Bastow T. P.: Soil gas carbon dioxide probe: laboratory testing and field evaluation. Environ. Sci.: Processes Impacts 2013, 15, 1062. <http://dx.doi.org/10.1039/c3em00100h>
  • Sousa Tânia, Chung Ana-Paula, Pereira Alcides, Piedade Ana Paula, Morais Paula V.: Aerobic uranium immobilization by Rhodanobacter A2-61 through formation of intracellular uranium–phosphate complexes. Metallomics 2013, 5, 390. <http://dx.doi.org/10.1039/c3mt00052d>
  • Ekwumemgbo P. A., Eddy N. O., Omoniyi I. K., Pirrone Nicola: Decontamination of Heavy Metals in Polluted Soil by Phytoremediation Using Bryophyllum Pinnatum. E3S Web of Conferences 2013, 1, 13004. <http://dx.doi.org/10.1051/e3sconf/20130113004>
  • Ngigi Anastasiah N., Getenga Zachary M., Dörfler Ulrike, Boga Hamadi I., Kuria Benson, Ndalut Paul, Schroll Reiner: Effects of carbon amendment on in situ atrazine degradation and total microbial biomass. Journal of Environmental Science and Health, Part B 2013, 48, 40. <http://dx.doi.org/10.1080/03601234.2012.716727>
  • Batty Lesley C., Dolan Colette: The Potential Use of Phytoremediation for Sites With Mixed Organic and Inorganic Contamination. Critical Reviews in Environmental Science and Technology 2013, 43, 217. <http://dx.doi.org/10.1080/10643389.2011.604254>
  • Tomei M. Concetta, Daugulis Andrew J.: Ex Situ Bioremediation of Contaminated Soils: An Overview of Conventional and Innovative Technologies. Critical Reviews in Environmental Science and Technology 2013, 43, 2107. <http://dx.doi.org/10.1080/10643389.2012.672056>
  • Obayori O. S., Ilori M. O., Amund O. O.: Degradation of Spiked Pyrene and Non-pyrene Hydrocarbons in Soil Microcosms by Pseudomonas Species Isolated From Petroleum Polluted Soils. Petroleum Science and Technology 2013, 31, 1674. <http://dx.doi.org/10.1080/10916466.2010.551240>
  • Zargar M., Sarrafzadeh M. H., Taheri B., Tavakoli O.: The Surveying of Soil and Groundwater Pollution in a Petroleum Refinery and the Potential of Bioremediation for Oil Decontamination. Petroleum Science and Technology 2013, 31, 2585. <http://dx.doi.org/10.1080/10916466.2011.559507>
  • Ribeiro Hugo, Almeida C. Marisa R., Mucha Ana Paula, Bordalo Adriano A.: INFLUENCE OF DIFFERENT SALT MARSH PLANTS ON HYDROCARBON DEGRADING MICROORGANISMS ABUNDANCE THROUGHOUT A PHENOLOGICAL CYCLE. International Journal of Phytoremediation 2013, 15, 715. <http://dx.doi.org/10.1080/15226514.2012.735285>
  • Norini M.-P., Secher C., Lollier M., Jézéquel K., Cornu J.-Y., Lebeau T.: Quantification of the 16S-23S rRNA internal transcribed spacers of Burkholderia xenovorans strain LB400 using real-time PCR in soil samples. Lett Appl Microbiol 2013, 56, 366. <http://dx.doi.org/10.1111/lam.12057>
  • Dávila Costa José Sebastián, Kothe Erika, Abate Carlos Mauricio, Amoroso María Julia: Unraveling the Amycolatopsis tucumanensis copper-resistome. Biometals 2012, 25, 905. <http://dx.doi.org/10.1007/s10534-012-9557-3>
  • Paisio Cintia E., Talano Melina A., González Paola S., Busto Víctor D., Talou Julián Rodríguez, Agostini Elizabeth: Isolation and characterization of a Rhodococcus strain with phenol-degrading ability and its potential use for tannery effluent biotreatment. Environ Sci Pollut Res 2012, 19, 3430. <http://dx.doi.org/10.1007/s11356-012-0870-8>
  • Paliwal Vasundhara, Puranik Sampada, Purohit Hemant J.: Integrated Perspective for Effective Bioremediation. Applied Biochemistry Biotechnology 2012, 166, 903. <http://dx.doi.org/10.1007/s12010-011-9479-5>
  • Sharma B., Tyagi S., Singh R., Singh P.: Monitoring of Organochlorine Pesticides in Fresh Water Samples by Gas Chromatography and Bioremediation Approaches. Natl. Acad. Sci. Lett. 2012, 35, 401. <http://dx.doi.org/10.1007/s40009-012-0070-6>
  • Hidayat Asep, Tachibana Sanro, Itoh Kazutaka: Determination of chrysene degradation under saline conditions by Fusarium sp. F092, a fungus screened from nature. Fungal Biology 2012, 116, 706. <http://dx.doi.org/10.1016/j.funbio.2012.04.004>
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  • Hidayat Asep, Tachibana Sanro: Characterization of polylactic acid (PLA)/kenaf composite degradation by immobilized mycelia of Pleurotus ostreatus. International Biodeterioration & Biodegradation 2012, 71, 50. <http://dx.doi.org/10.1016/j.ibiod.2012.02.007>
  • Sari Ajeng Arum, Tachibana Sanro, Itoh Kazutaka: Determination of co-metabolism for 1,1,1-trichloro-2,2-bis(4-chlorophenyl) ethane (DDT) degradation with enzymes from Trametes versicolor U97. Journal of Bioscience and Bioengineering 2012, 114, 176. <http://dx.doi.org/10.1016/j.jbiosc.2012.03.006>
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  • Sukor Mohd Zaki, Yin Chun-Yang, Savory Robert Mikhail, Abdul-Talib Suhaimi: Biodegradation Kinetics of Naphthalene in Soil Medium Using Pleurotus Ostreatus in Batch Mode with Addition of Fibrous Biomass as a Nutrient. Bioremediation Journal 2012, 16, 177. <http://dx.doi.org/10.1080/10889868.2012.687417>
  • Dhir Bhupinder, Srivastava Sheela: Disposal of Metal Treated Salvinia Biomass in Soil and its Effect on Growth and Photosynthetic Efficiency of Wheat. Int J of Phytoremediation 2012, 14, 24. <http://dx.doi.org/10.1080/15226514.2010.532180>
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  • Nopcharoenkul W., Pinphanichakarn P., Pinyakong O.: The development of a liquid formulation of Pseudoxanthomonas sp. RN402 and its application in the treatment of pyrene-contaminated soil : Liquid formulation of Pseudoxanthomonas for bioremediation. J Appl Microbiol 2011, 111, 36. <http://dx.doi.org/10.1111/j.1365-2672.2011.05037.x>
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